Boston Cream Cupcakes

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These Boston cream cupcakes bring all the flavors of the classic pie in a handheld treat. Vanilla cake, creamy filling, and chocolate ganache in 55 minutes.

Tags: #chocolate #cakes

Clare Greco
Updated on Fri, 12 Sep 2025 15:48:21 GMT
Boston Cream Pie Cupcakes Recipe
Boston Cream Pie Cupcakes Recipe | recipesbyclare.com
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Boston Cream Cupcakes turn the classic combination of vanilla cake, pastry cream, and chocolate ganache into 16 individual desserts. A yellow cake mix keeps the crumb dependable while the homemade filling and glossy topping provide the familiar bakery character.

The recipe takes about 55 minutes, including 40 minutes of preparation and 15 minutes of baking, plus the cooling needed before filling. Pastry cream and cupcakes must both cool before assembly.

Boston Cream Cupcake Ingredients

Sugar, cornstarch, milk, two yolks, butter, vanilla, yellow cake mix, three eggs, chocolate chips, cream, and powdered sugar
Sugar, cornstarch, milk, two yolks, butter, vanilla, yellow cake mix, three eggs, chocolate chips, cream, and powdered sugar | Recipes by Clare
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For pastry cream, use ¼ cup granulated sugar, 1 tablespoon cornstarch, 1 cup whole milk, 2 large egg yolks, 1 tablespoon unsalted butter, and 1 teaspoon pure vanilla extract.

For cupcakes, use 13.25 ounces yellow cake mix, 1 cup water, ⅓ cup melted unsalted butter, and 3 large eggs. For ganache, use ½ cup semisweet chocolate chips, ¼ cup heavy cream, and 2 tablespoons powdered sugar.

How to Make Boston Cream Cupcakes

Four stages showing pastry cream cooked, sixteen cupcakes cooled, sixteen centers filled, and sixteen cupcakes topped with ganache
Four stages showing pastry cream cooked, sixteen cupcakes cooled, sixteen centers filled, and sixteen cupcakes topped with ganache | Recipes by Clare
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  1. Whisk sugar, cornstarch, and milk in a saucepan. Cook over medium, stirring, until thick and bubbling; simmer 1 minute.
  2. Temper yolks with a little hot milk mixture, whisk them back into the pan, and gently boil 2 minutes. Remove from heat; add butter and vanilla. Cool.
  3. At 350°F, line two 12-cup tins. Mix cake mix, water, melted butter, and 3 eggs just until combined. Fill liners halfway and bake 15 minutes. Cool completely.
  4. Microwave chocolate chips and cream in 15-second intervals until smooth. Sift in powdered sugar and cool 10 minutes.
  5. Cut a 1-inch-wide, 1-inch-deep center from each of 16 cupcakes, fill with pastry cream, and top with ganache.

Whisk the Pastry Cream Base Smooth

Temper Two Egg Yolks

Boil Two Minutes, Then Add Butter and Vanilla

Mix the Yellow Cupcake Batter Gently

Fill Halfway and Bake Fifteen Minutes

Make Ganache in Fifteen-Second Intervals

Cut a One-Inch Center From Each Cupcake

Finished Boston cream cupcakes filled with pastry cream and topped with glossy chocolate ganache
Finished Boston cream cupcakes filled with pastry cream and topped with glossy chocolate ganache | recipesbyclare.com
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Fill and Top All Sixteen

Storage and Food Safety

Avoid Lumpy Cream or Runny Ganache

Conclusion

Cook sugar, cornstarch, and milk until thick; temper 2 yolks, return them, and boil gently 2 minutes before adding butter and vanilla. Bake 16 half-filled cupcakes at 350°F for 15 minutes and cool. Melt chocolate chips with cream in 15-second intervals, add powdered sugar, and cool 10 minutes. Cut 1-inch cavities, fill with pastry cream, and top with ganache.

Frequently Asked Questions

→ How many cupcakes does the recipe make?

It makes exactly 16 filled and ganache-topped cupcakes.

→ How deep should I cut each center?

Cut a cavity about 1 inch wide and 1 inch deep.

→ How long should the ganache cool?

Let it cool for about 10 minutes, until thick enough to top the cakes.

→ How should finished cupcakes be stored?

Keep them covered in the refrigerator for up to four days; freezing is not recommended.

4.50 from 76 votes

Boston Cream Cupcakes

Preparation Time:
40 Minutes
Cook Time:
15 Minutes
Total Cooking Time:
55 Minutes
Number of Servings:
16
Boston Cream Pie Cupcakes Recipe
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Soft vanilla cupcakes with pastry cream filling and rich chocolate ganache topping. Classic Boston cream pie in cupcake form.

Ingredients You'll Need

  • Pastry Cream Filling

  • Vanilla Cupcakes

  • Chocolate Ganache Topping

How to Make It

1.

1. Make the Pastry Cream: In a large saucepan, whisk together sugar, cornstarch, and milk until smooth. Cook over medium heat, stirring constantly, until the mixture thickens and starts to bubble. Let it simmer for 1 minute, then remove from heat.

2.

2. Temper the Egg Yolks: Slowly whisk a small amount of the hot milk mixture into the egg yolks to warm them up. Then pour this egg mixture back into the saucepan, whisking constantly to prevent scrambling.

3.

3. Finish the Cream: Return the pan to medium heat and bring to a gentle boil. Cook for 2 minutes, stirring continuously. Remove from heat and stir in butter and vanilla until smooth. Let cool to room temperature.

4.

4. Bake the Cupcakes: Preheat oven to 350°F and line two 12-cup muffin tins with paper liners. Mix cake mix, water, melted butter, and eggs until just combined. Fill liners halfway and bake for 15 minutes until a toothpick comes out clean. Cool completely.

5.

5. Make Chocolate Ganache: Combine chocolate chips and heavy cream in a microwave-safe bowl. Heat in 15-second intervals until chocolate melts completely. Sift in powdered sugar and let cool for 10 minutes until it thickens.

6.

6. Assemble the Cupcakes: Use a knife to cut out the center of each cupcake about 1 inch wide and 1 inch deep. Fill each hollow with pastry cream using a piping bag or spoon. Top each cupcake with a generous dollop of chocolate ganache.

Extra Information

  1. Cut cupcake centers about 1 inch wide and 1 inch deep for the perfect cream-to-cake ratio
  2. Use a piping bag for neater filling - gives better control than spooning cream into cupcakes
  3. Let ganache cool for 10-15 minutes before topping to achieve the perfect thick consistency
  4. Store finished cupcakes in refrigerator for up to 4 days - freezing not recommended due to cream filling

Essential Tools

  • 2 cupcake tins (12-count each)
  • Hand mixer
  • Large saucepan
  • Piping bag and tips (optional)
  • Kitchen scale (optional)

Allergy Warnings

Please check ingredients for potential allergens and consult a health professional if in doubt.
  • Contains eggs
  • Contains dairy
  • Contains gluten

Nutrition Details (Per Portion)

It is important to consider this information as approximate and not to use it as definitive health advice.
  • Calories: 220
  • Total Fat: 11 g
  • Total Carbohydrate: 28 g
  • Protein: 3 g